Blog — Bioinformatics

Paper on reproducible bioinformatics pipelines with Guix

9. Mai 2018

I’m happy to announce that the bioinformatics group at the Max Delbrück Center that I’m working with has released a preprint of a paper on reproducibility with theblog post summary ellipsis…

Back from RSE 2017

11. September 2017

Last week, I was in Manchester, UK, to attend the second conference of Research Software Engineers, or RSE 2017 for short. I presented on the topic ofblog post summary ellipsis…

Announcing Guix-HPC

5. September 2017

Today, Inria, the Max Delbrück Center for Molecular Medicine (MDC), and the Utrecht Bioinformatics Center (UBC) are announcing a joint effort to consolidate GNU Guix for reproducible scientific workflows in high-performanceblog post summary ellipsis…

Back from BOSC 2017

25. Juli 2017

On the 23rd and 24th of July, Pjotr Prins and I visited Prague to attend BOSC 2017 , the 18th annual Bioinformatics Open Source Conference. We combined ourblog post summary ellipsis…

Back from GBCUW 2016

13. September 2016

On the 12th of September, I attended the German Bioinformatics Core Unit Workshop , a satellite workshop on behalf of the German Conference on Bioinformatics (GCB) 2016. I gaveblog post summary ellipsis…

Guix at OpenBio Codefest 2014

13. Juli 2014

On Wednesday, July 9th, David Thompson gave a brief introduction to GNU Guix at the Open Bioinformatics Codefest 2014 hackathon . The objective of the Codefestblog post summary ellipsis…