r-bseqsc 1.0-1.fef3f3e Deconvolution of bulk sequencing experiments using single cell data
BSeq-sc is a bioinformatics analysis pipeline that leverages single-cell sequencing data to estimate cell type proportion and cell type-specific gene expression differences from RNA-seq data from bulk tissue samples. This is a companion package to the publication "A single-cell transcriptomic map of the human and mouse pancreas reveals inter- and intra-cell population structure." Baron et al. Cell Systems (2016) https://www.ncbi.nlm.nih.gov/pubmed/27667365.
- Website: https://github.com/shenorrLab/bseqsc
- License: GPL 2+
- Package source: bioinformatics.scm
- Patches: None
- Builds: x86_64-linux, i686-linux