roary 3.12.0 High speed stand-alone pan genome pipeline
Roary is a high speed stand alone pan genome pipeline, which takes annotated assemblies in GFF3 format (produced by the Prokka program) and calculates the pan genome. Using a standard desktop PC, it can analyse datasets with thousands of samples, without compromising the quality of the results. 128 samples can be analysed in under 1 hour using 1 GB of RAM and a single processor. Roary is not intended for metagenomics or for comparing extremely diverse sets of genomes.
- Website: https://sanger-pathogens.github.io/Roary/
- License: GPL 3
- Package source: bioinformatics.scm
- Patches: None
- Builds: x86_64-linux, i686-linux