samblaster 0.1.24 Mark duplicates in paired-end SAM files
Samblaster is a fast and flexible program for marking duplicates in read-id grouped paired-end SAM files. It can also optionally output discordant read pairs and/or split read mappings to separate SAM files, and/or unmapped/clipped reads to a separate FASTQ file. When marking duplicates, samblaster will require approximately 20MB of memory per 1M read pairs.
- Website: https://github.com/GregoryFaust/samblaster
- License: Expat
- Package source: bioinformatics.scm
- Patches: None
- Builds: x86_64-linux, i686-linux