tophat 2.1.1 Spliced read mapper for RNA-Seq data
TopHat is a fast splice junction mapper for nucleotide sequence reads produced by the RNA-Seq method. It aligns RNA-Seq reads to mammalian-sized genomes using the ultra high-throughput short read aligner Bowtie, and then analyzes the mapping results to identify splice junctions between exons.
- Website: https://ccb.jhu.edu/software/tophat/index.shtml
- License: Boost 1.0
- Package source: bioinformatics.scm
- Patches: snippet
- Builds: x86_64-linux